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Mari is helping Dad work.
Today, he got dressed for work to design some new dog toy-making algorithms. #nationalpetday
Transforming my furry friend into a grayscale masterpiece with MATLAB! 🐾 #MATLABPetsDay ✌️
This is Stella while waiting to see if the code works...
The beautiful and elegant chord diagrams were all created using MATLAB?
Indeed, they were all generated using the chord diagram plotting toolkit that I developed myself:
- - Chord chart: [chord chart](https://www.mathworks.com/matlabcentral/fileexchange/116550-chord-chart)
- - Directed graph chord chart: [digraph chord chart]:(https://www.mathworks.com/matlabcentral/fileexchange/121043-digraph-chord-chart)
You can download these toolkits from the provided links.
The reason for writing this article is that many people have started using the chord diagram plotting toolkit that I developed. However, some users are unsure about customizing certain styles. As the developer, I have a good understanding of the implementation principles of the toolkit and can apply it flexibly. This has sparked the idea of challenging myself to create various styles of chord diagrams. Currently, the existing code is quite lengthy. In the future, I may integrate some of this code into the toolkit, enabling users to achieve the effects of many lines of code with just a few lines.
Without further ado, let's see the extent to which this MATLAB toolkit can currently perform.
demo 1
rng(2)
dataMat = randi([0,5], [11,5]);
dataMat(1:6,1) = 0;
dataMat([11,7],1) = [45,25];
dataMat([1,4,5,7],2) = [20,20,30,30];
dataMat(:,3) = 0;
dataMat(6,3) = 45;
dataMat(1:5,4) = 0;
dataMat([6,7],4) = [25,25];
dataMat([5,6,9],5) = [25,25,25];
colName = {'Fly', 'Beetle', 'Leaf', 'Soil', 'Waxberry'};
rowName = {'Bartomella', 'Bradyrhizobium', 'Dysgomonas', 'Enterococcus',...
'Lactococcus', 'norank', 'others', 'Pseudomonas', 'uncultured',...
'Vibrionimonas', 'Wolbachia'};
figure('Units','normalized', 'Position',[.02,.05,.6,.85])
CC = chordChart(dataMat, 'rowName',rowName, 'colName',colName, 'Sep',1/80);
CC = CC.draw();
% 修改上方方块颜色(Modify the color of the blocks above)
CListT = [0.7765 0.8118 0.5216; 0.4431 0.4706 0.3843; 0.5804 0.2275 0.4549;
0.4471 0.4039 0.6745; 0.0157 0 0 ];
for i = 1:size(dataMat, 2)
CC.setSquareT_N(i, 'FaceColor',CListT(i,:))
end
% 修改下方方块颜色(Modify the color of the blocks below)
CListF = [0.5843 0.6863 0.7843; 0.1098 0.1647 0.3255; 0.0902 0.1608 0.5373;
0.6314 0.7961 0.2118; 0.0392 0.2078 0.1059; 0.0157 0 0 ;
0.8549 0.9294 0.8745; 0.3882 0.3255 0.4078; 0.5020 0.7216 0.3843;
0.0902 0.1843 0.1804; 0.8196 0.2314 0.0706];
for i = 1:size(dataMat, 1)
CC.setSquareF_N(i, 'FaceColor',CListF(i,:))
end
% 修改弦颜色(Modify chord color)
for i = 1:size(dataMat, 1)
for j = 1:size(dataMat, 2)
CC.setChordMN(i,j, 'FaceColor',CListT(j,:), 'FaceAlpha',.5)
end
end
CC.tickState('on')
CC.labelRotate('on')
CC.setFont('FontSize',17, 'FontName','Cambria')
% CC.labelRotate('off')
% textHdl = findobj(gca,'Tag','ChordLabel');
% for i = 1:length(textHdl)
% if textHdl(i).Position(2) < 0
% if abs(textHdl(i).Position(1)) > .7
% textHdl(i).Rotation = textHdl(i).Rotation + 45;
% textHdl(i).HorizontalAlignment = 'right';
% if textHdl(i).Rotation > 90
% textHdl(i).Rotation = textHdl(i).Rotation + 180;
% textHdl(i).HorizontalAlignment = 'left';
% end
% else
% textHdl(i).Rotation = textHdl(i).Rotation + 10;
% textHdl(i).HorizontalAlignment = 'right';
% end
% end
% end
demo 2
rng(3)
dataMat = randi([1,15], [7,22]);
dataMat(dataMat < 11) = 0;
dataMat(1, sum(dataMat, 1) == 0) = 15;
colName = {'A2M', 'FGA', 'FGB', 'FGG', 'F11', 'KLKB1', 'SERPINE1', 'VWF',...
'THBD', 'TFPI', 'PLAT', 'SERPINA5', 'SERPIND1', 'F2', 'PLG', 'F12',...
'SERPINC1', 'SERPINA1', 'PROS1', 'SERPINF2', 'F13A1', 'PROC'};
rowName = {'Lung', 'Spleen', 'Liver', 'Heart',...
'Renal cortex', 'Renal medulla', 'Thyroid'};
figure('Units','normalized', 'Position',[.02,.05,.6,.85])
CC = chordChart(dataMat, 'rowName',rowName, 'colName',colName, 'Sep',1/80, 'LRadius',1.21);
CC = CC.draw();
CC.labelRotate('on')
% 单独设置每一个弦末端方块(Set individual end blocks for each chord)
% Use obj.setEachSquareF_Prop
% or obj.setEachSquareT_Prop
% F means from (blocks below)
% T means to (blocks above)
CListT = [173,70,65; 79,135,136]./255;
% Upregulated:1 | Downregulated:2
Regulated = rand([7, 22]);
Regulated = (Regulated < .8) + 1;
for i = 1:size(Regulated, 1)
for j = 1:size(Regulated, 2)
CC.setEachSquareT_Prop(i, j, 'FaceColor', CListT(Regulated(i,j),:))
end
end
% 绘制图例(Draw legend)
H1 = fill([0,1,0] + 100, [1,0,1] + 100, CListT(1,:), 'EdgeColor','none');
H2 = fill([0,1,0] + 100, [1,0,1] + 100, CListT(2,:), 'EdgeColor','none');
lgdHdl = legend([H1,H2], {'Upregulated','Downregulated'}, 'AutoUpdate','off', 'Location','best');
lgdHdl.ItemTokenSize = [12,12];
lgdHdl.Box = 'off';
lgdHdl.FontSize = 13;
% 修改下方方块颜色(Modify the color of the blocks below)
CListF = [128,108,171; 222,208,161; 180,196,229; 209,150,146; 175,201,166;
134,156,118; 175,175,173]./255;
for i = 1:size(dataMat, 1)
CC.setSquareF_N(i, 'FaceColor',CListF(i,:))
end
% 修改弦颜色(Modify chord color)
for i = 1:size(dataMat, 1)
for j = 1:size(dataMat, 2)
CC.setChordMN(i,j, 'FaceColor',CListF(i,:), 'FaceAlpha',.45)
end
end
demo 3
dataMat = rand([15,15]);
dataMat(dataMat > .15) = 0;
CList = [ 75,146,241; 252,180, 65; 224, 64, 10; 5,100,146; 191,191,191;
26, 59,105; 255,227,130; 18,156,221; 202,107, 75; 0, 92,219;
243,210,136; 80, 99,129; 241,185,168; 224,131, 10; 120,147,190]./255;
figure('Units','normalized', 'Position',[.02,.05,.6,.85])
BCC = biChordChart(dataMat, 'Arrow','on', 'CData',CList);
BCC = BCC.draw();
% 添加刻度
BCC.tickState('on')
% 修改字体，字号及颜色
BCC.setFont('FontName','Cambria', 'FontSize',17, 'Color',[0,0,.8])
demo 4
rng(5)
dataMat = randi([1,20], [5,5]);
dataMat(1,1) = 110;
dataMat(2,2) = 40;
dataMat(3,3) = 50;
dataMat(5,5) = 50;
CList1 = [164,190,158; 216,213,153; 177,192,208; 238,238,227; 249,217,153]./255;
CList2 = [247,204,138; 128,187,185; 245,135,124; 140,199,197; 252,223,164]./255;
CList = CList2;
NameList={'CHORD','CHART','MADE','BY','SLANDARER'};
figure('Units','normalized', 'Position',[.02,.05,.6,.85])
BCC = biChordChart(dataMat, 'Arrow','on', 'CData',CList, 'Sep',1/30, 'Label',NameList, 'LRadius',1.33);
BCC = BCC.draw();
% 添加刻度
BCC.tickState('on')
% 修改弦颜色(Modify chord color)
for i = 1:size(dataMat, 1)
for j = 1:size(dataMat, 2)
if dataMat(i,j) > 0
BCC.setChordMN(i,j, 'FaceAlpha',.7, 'EdgeColor',CList(i,:)./1.1)
end
end
end
% 修改方块颜色(Modify the color of the blocks)
for i = 1:size(dataMat, 1)
BCC.setSquareN(i, 'EdgeColor',CList(i,:)./1.7)
end
% 修改字体，字号及颜色
BCC.setFont('FontName','Cambria', 'FontSize',17)
BCC.tickLabelState('on')
BCC.setTickFont('FontName','Cambria', 'FontSize',9)
demo 5
dataMat=randi([1,20], [14,3]);
dataMat(11:14,1) = 0;
dataMat(6:10,2) = 0;
dataMat(1:5,3) = 0;
colName = compose('C%d', 1:3);
rowName = [compose('A%d', 1:7), compose('B%d', 7:-1:1)];
figure('Units','normalized', 'Position',[.02,.05,.6,.85])
CC = chordChart(dataMat, 'rowName',rowName, 'colName',colName, 'Sep',1/80);
CC = CC.draw();
% 修改上方方块颜色(Modify the color of the blocks above)
for i = 1:size(dataMat, 2)
CC.setSquareT_N(i, 'FaceColor',[190,190,190]./255)
end
% 修改下方方块颜色(Modify the color of the blocks below)
CListF=[255,244,138; 253,220,117; 254,179, 78; 253,190, 61;
252, 78, 41; 228, 26, 26; 178, 0, 36; 4, 84,119;
1,113,137; 21,150,155; 67,176,173; 68,173,158;
123,204,163; 184,229,162]./255;
for i = 1:size(dataMat, 1)
CC.setSquareF_N(i, 'FaceColor',CListF(i,:))
end
% 修改弦颜色(Modify chord color)
for i = 1:size(dataMat, 1)
for j = 1:size(dataMat, 2)
CC.setChordMN(i,j, 'FaceColor',CListF(i,:), 'FaceAlpha',.5)
end
end
CC.tickState('on')
CC.tickLabelState('on')
demo 6
rng(2)
dataMat = randi([0,40], [20,4]);
dataMat(rand([20,4]) < .2) = 0;
dataMat(1,3) = 500;
dataMat(20,1:4) = [140; 150; 80; 90];
colName = compose('T%d', 1:4);
rowName = compose('SL%d', 1:20);
figure('Units','normalized', 'Position',[.02,.05,.6,.85])
CC = chordChart(dataMat, 'rowName',rowName, 'colName',colName, 'Sep',1/80, 'LRadius',1.23);
CC = CC.draw();
% 修改上方方块颜色(Modify the color of the blocks above)
CListT = [0.62,0.49,0.27; 0.28,0.57,0.76
0.25,0.53,0.30; 0.86,0.48,0.34];
for i = 1:size(dataMat, 2)
CC.setSquareT_N(i, 'FaceColor',CListT(i,:))
end
% 修改下方方块颜色(Modify the color of the blocks below)
CListF = [0.94,0.84,0.60; 0.16,0.50,0.67; 0.92,0.62,0.49;
0.48,0.44,0.60; 0.48,0.44,0.60; 0.71,0.79,0.73;
0.96,0.98,0.98; 0.51,0.82,0.95; 0.98,0.70,0.82;
0.97,0.85,0.84; 0.55,0.64,0.62; 0.94,0.93,0.60;
0.98,0.90,0.85; 0.72,0.84,0.81; 0.85,0.45,0.49;
0.76,0.76,0.84; 0.59,0.64,0.62; 0.62,0.14,0.15;
0.75,0.75,0.75; 1.00,1.00,1.00];
for i = 1:size(dataMat, 1)
CC.setSquareF_N(i, 'FaceColor',CListF(i,:))
end
CC.setSquareF_N(size(dataMat, 1), 'EdgeColor','k', 'LineWidth',1)
% 修改弦颜色(Modify chord color)
for i = 1:size(dataMat, 1)
for j = 1:size(dataMat, 2)
CC.setChordMN(i,j, 'FaceColor',CListT(j,:), 'FaceAlpha',.46)
end
end
CC.tickState('on')
CC.labelRotate('on')
CC.setFont('FontSize',17, 'FontName','Cambria')
demo 7
dataMat = randi([10,10000], [10,10]);
dataMat(6:10,:) = 0;
dataMat(:,1:5) = 0;
NameList = {'BOC', 'ICBC', 'ABC', 'BOCM', 'CCB', ...
'yama', 'nikoto', 'saki', 'koto', 'kawa'};
CList = [0.63,0.75,0.88
0.67,0.84,0.75
0.85,0.78,0.88
1.00,0.92,0.93
0.92,0.63,0.64
0.57,0.67,0.75
1.00,0.65,0.44
0.72,0.73,0.40
0.65,0.57,0.58
0.92,0.94,0.96];
figure('Units','normalized', 'Position',[.02,.05,.6,.85])
BCC = biChordChart(dataMat, 'Arrow','on', 'CData',CList, 'Label',NameList);
BCC = BCC.draw();
% 修改弦颜色(Modify chord color)
for i = 1:size(dataMat, 1)
for j = 1:size(dataMat, 2)
if dataMat(i,j) > 0
BCC.setChordMN(i,j, 'FaceAlpha',.85, 'EdgeColor',CList(i,:)./1.5, 'LineWidth',.8)
end
end
end
for i = 1:size(dataMat, 1)
BCC.setSquareN(i, 'EdgeColor',CList(i,:)./1.5, 'LineWidth',1)
end
% 添加刻度、修改字体
BCC.tickState('on')
BCC.setFont('FontName','Cambria', 'FontSize',17)
demo 8
dataMat = rand([11,4]);
dataMat = round(10.*dataMat.*((11:-1:1).'+1))./10;
colName = {'A','B','C','D'};
rowName = {'Acidobacteriota', 'Actinobacteriota', 'Proteobacteria', ...
'Chloroflexi', 'Bacteroidota', 'Firmicutes', 'Gemmatimonadota', ...
'Verrucomicrobiota', 'Patescibacteria', 'Planctomyetota', 'Others'};
figure('Units','normalized', 'Position',[.02,.05,.8,.85])
CC = chordChart(dataMat, 'colName',colName, 'Sep',1/80, 'SSqRatio',30/100);% -30/100
CC = CC.draw();
% 修改上方方块颜色(Modify the color of the blocks above)
CListT = [0.93,0.60,0.62
0.55,0.80,0.99
0.95,0.82,0.18
1.00,0.81,0.91];
for i = 1:size(dataMat, 2)
CC.setSquareT_N(i, 'FaceColor',CListT(i,:))
end
% 修改下方方块颜色(Modify the color of the blocks below)
CListF = [0.75,0.73,0.86
0.56,0.83,0.78
0.00,0.60,0.20
1.00,0.49,0.02
0.78,0.77,0.95
0.59,0.24,0.36
0.98,0.51,0.45
0.96,0.55,0.75
0.47,0.71,0.84
0.65,0.35,0.16
0.40,0.00,0.64];
for i = 1:size(dataMat, 1)
CC.setSquareF_N(i, 'FaceColor',CListF(i,:))
end
% 修改弦颜色(Modify chord color)
CListC = [0.55,0.83,0.76
0.75,0.73,0.86
0.00,0.60,0.19
1.00,0.51,0.04];
for i = 1:size(dataMat, 1)
for j = 1:size(dataMat, 2)
CC.setChordMN(i,j, 'FaceColor',CListC(j,:), 'FaceAlpha',.4)
end
end
% 单独设置每一个弦末端方块(Set individual end blocks for each chord)
% Use obj.setEachSquareF_Prop
% or obj.setEachSquareT_Prop
% F means from (blocks below)
% T means to (blocks above)
for i = 1:size(dataMat, 1)
for j = 1:size(dataMat, 2)
CC.setEachSquareT_Prop(i,j, 'FaceColor', CListF(i,:))
end
end
% 添加刻度
CC.tickState('on')
% 修改字体，字号及颜色
CC.setFont('FontName','Cambria', 'FontSize',17)
% 隐藏下方标签
textHdl = findobj(gca, 'Tag','ChordLabel');
for i = 1:length(textHdl)
if textHdl(i).Position(2) < 0
set(textHdl(i), 'Visible','off')
end
end
% 绘制图例(Draw legend)
scatterHdl = scatter(10.*ones(size(dataMat,1)),10.*ones(size(dataMat,1)), ...
55, 'filled');
for i = 1:length(scatterHdl)
scatterHdl(i).CData = CListF(i,:);
end
lgdHdl = legend(scatterHdl, rowName, 'Location','best', 'FontSize',16, 'FontName','Cambria', 'Box','off');
set(lgdHdl, 'Position',[.7482,.3577,.1658,.3254])
demo 9
dataMat = randi([0,10], [5,5]);
CList1 = [0.70,0.59,0.67
0.62,0.70,0.62
0.81,0.75,0.62
0.80,0.62,0.56
0.62,0.65,0.65];
CList2 = [0.02,0.02,0.02
0.59,0.26,0.33
0.38,0.49,0.38
0.03,0.05,0.03
0.29,0.28,0.32];
CList = CList2;
NameList={'CHORD','CHART','MADE','BY','SLANDARER'};
figure('Units','normalized', 'Position',[.02,.05,.6,.85])
BCC = biChordChart(dataMat, 'Arrow','on', 'CData',CList, 'Sep',1/30, 'Label',NameList, 'LRadius',1.33);
BCC = BCC.draw();
% 修改弦颜色(Modify chord color)
for i = 1:size(dataMat, 1)
for j = 1:size(dataMat, 2)
BCC.setChordMN(i,j, 'FaceAlpha',.5)
end
end
% 修改方块颜色(Modify the color of the blocks)
for i = 1:size(dataMat, 1)
BCC.setSquareN(i, 'EdgeColor',[0,0,0], 'LineWidth',5)
end
% 添加刻度
BCC.tickState('on')
% 修改字体，字号及颜色
BCC.setFont('FontSize',17, 'FontWeight','bold')
BCC.tickLabelState('on')
BCC.setTickFont('FontSize',9)
demo 10
rng(2)
dataMat = rand([14,5]) > .3;
colName = {'phosphorylation', 'vasculature development', 'blood vessel development', ...
'cell adhesion', 'plasma membrane'};
rowName = {'THY1', 'FGF2', 'MAP2K1', 'CDH2', 'HBEGF', 'CXCR4', 'ECSCR',...
'ACVRL1', 'RECK', 'PNPLA6', 'CDH5', 'AMOT', 'EFNB2', 'CAV1'};
figure('Units','normalized', 'Position',[.02,.05,.9,.85])
CC = chordChart(dataMat, 'colName',colName, 'rowName',rowName, 'Sep',1/80, 'LRadius',1.2);
CC = CC.draw();
% 修改上方方块颜色(Modify the color of the blocks above)
CListT1 = [0.5686 0.1961 0.2275
0.2275 0.2863 0.3765
0.8431 0.7882 0.4118
0.4275 0.4510 0.2706
0.3333 0.2706 0.2510];
CListT2 = [0.4941 0.5490 0.4118
0.9059 0.6510 0.3333
0.8980 0.6157 0.4980
0.8902 0.5137 0.4667
0.4275 0.2824 0.2784];
CListT3 = [0.4745 0.5843 0.7569
0.4824 0.5490 0.5843
0.6549 0.7216 0.6510
0.9412 0.9216 0.9059
0.9804 0.7608 0.6863];
CListT = CListT3;
for i = 1:size(dataMat, 2)
CC.setSquareT_N(i, 'FaceColor',CListT(i,:), 'EdgeColor',[0,0,0])
end
% 修改弦颜色(Modify chord color)
for i = 1:size(dataMat, 1)
for j = 1:size(dataMat, 2)
CC.setChordMN(i,j, 'FaceColor',CListT(j,:), 'FaceAlpha',.9, 'EdgeColor',[0,0,0])
end
end
% 修改下方方块颜色(Modify the color of the blocks below)
logFC = sort(rand(1,14))*6 - 3;
for i = 1:size(dataMat, 1)
CC.setSquareF_N(i, 'CData',logFC(i), 'FaceColor','flat', 'EdgeColor',[0,0,0])
end
CMap = [ 0 0 1.0000; 0.0645 0.0645 1.0000; 0.1290 0.1290 1.0000; 0.1935 0.1935 1.0000
0.2581 0.2581 1.0000; 0.3226 0.3226 1.0000; 0.3871 0.3871 1.0000; 0.4516 0.4516 1.0000
0.5161 0.5161 1.0000; 0.5806 0.5806 1.0000; 0.6452 0.6452 1.0000; 0.7097 0.7097 1.0000
0.7742 0.7742 1.0000; 0.8387 0.8387 1.0000; 0.9032 0.9032 1.0000; 0.9677 0.9677 1.0000
1.0000 0.9677 0.9677; 1.0000 0.9032 0.9032; 1.0000 0.8387 0.8387; 1.0000 0.7742 0.7742
1.0000 0.7097 0.7097; 1.0000 0.6452 0.6452; 1.0000 0.5806 0.5806; 1.0000 0.5161 0.5161
1.0000 0.4516 0.4516; 1.0000 0.3871 0.3871; 1.0000 0.3226 0.3226; 1.0000 0.2581 0.2581
1.0000 0.1935 0.1935; 1.0000 0.1290 0.1290; 1.0000 0.0645 0.0645; 1.0000 0 0];
colormap(CMap);
try clim([-3,3]),catch,end
try caxis([-3,3]),catch,end
CBHdl = colorbar();
CBHdl.Position = [0.74,0.25,0.02,0.2];
% =========================================================================
% 交换XY轴(Swap XY axis)
patchHdl = findobj(gca, 'Type','patch');
for i = 1:length(patchHdl)
tX = patchHdl(i).XData;
tY = patchHdl(i).YData;
patchHdl(i).XData = tY;
patchHdl(i).YData = - tX;
end
txtHdl = findobj(gca, 'Type','text');
for i = 1:length(txtHdl)
txtHdl(i).Position([1,2]) = [1,-1].*txtHdl(i).Position([2,1]);
if txtHdl(i).Position(1) < 0
txtHdl(i).HorizontalAlignment = 'right';
else
txtHdl(i).HorizontalAlignment = 'left';
end
end
lineHdl = findobj(gca, 'Type','line');
for i = 1:length(lineHdl)
tX = lineHdl(i).XData;
tY = lineHdl(i).YData;
lineHdl(i).XData = tY;
lineHdl(i).YData = - tX;
end
% =========================================================================
txtHdl = findobj(gca, 'Type','text');
for i = 1:length(txtHdl)
if txtHdl(i).Position(1) > 0
txtHdl(i).Visible = 'off';
end
end
text(1.25,-.15, 'LogFC', 'FontSize',16)
text(1.25,1, 'Terms', 'FontSize',16)
patchHdl = [];
for i = 1:size(dataMat, 2)
patchHdl(i) = fill([10,11,12],[10,13,13], CListT(i,:), 'EdgeColor',[0,0,0]);
end
lgdHdl = legend(patchHdl, colName, 'Location','best', 'FontSize',14, 'FontName','Cambria', 'Box','off');
lgdHdl.Position = [.735,.53,.167,.27];
lgdHdl.ItemTokenSize = [18,8];
demo 11
rng(2)
dataMat = rand([12,12]);
dataMat(dataMat < .85) = 0;
dataMat(7,:) = 1.*(rand(1,12)+.1);
dataMat(11,:) = .6.*(rand(1,12)+.1);
dataMat(12,:) = [2.*(rand(1,10)+.1), 0, 0];
CList = [repmat([49,49,49],[10,1]); 235,28,34; 19,146,241]./255;
figure('Units','normalized', 'Position',[.02,.05,.6,.85])
BCC = biChordChart(dataMat, 'Arrow','off', 'CData',CList);
BCC = BCC.draw();
% 添加刻度
BCC.tickState('on')
% 修改字体，字号及颜色
BCC.setFont('FontName','Cambria', 'FontSize',17)
% 修改弦颜色(Modify chord color)
for i = 1:size(dataMat, 1)
for j = 1:size(dataMat, 2)
if dataMat(i,j) > 0
BCC.setChordMN(i,j, 'FaceAlpha',.78, 'EdgeColor',[0,0,0])
end
end
end
% 修改方块颜色(Modify the color of the blocks)
for i = 1:size(dataMat, 1)
BCC.setSquareN(i, 'EdgeColor',[0,0,0], 'LineWidth',2)
end
demo 12
dataMat = rand([9,9]);
dataMat(dataMat > .7) = 0;
dataMat(eye(9) == 1) = (rand([1,9])+.2).*3;
CList = [0.85,0.23,0.24
0.96,0.39,0.18
0.98,0.63,0.22
0.99,0.80,0.26
0.70,0.76,0.21
0.24,0.74,0.71
0.27,0.65,0.84
0.09,0.37,0.80
0.64,0.40,0.84];
figure('Units','normalized', 'Position',[.02,.05,.6,.85])
BCC = biChordChart(dataMat, 'Arrow','on', 'CData',CList);
BCC = BCC.draw();
% 添加刻度、刻度标签
BCC.tickState('on')
% 修改字体，字号及颜色
BCC.setFont('FontName','Cambria', 'FontSize',17)
% 修改弦颜色(Modify chord color)
for i = 1:size(dataMat, 1)
for j = 1:size(dataMat, 2)
if dataMat(i,j) > 0
BCC.setChordMN(i,j, 'FaceAlpha',.7)
end
end
end
demo 13
rng(2)
dataMat = randi([1,40], [7,4]);
dataMat(rand([7,4]) < .1) = 0;
colName = compose('MATLAB%d', 1:4);
rowName = compose('SL%d', 1:7);
figure('Units','normalized', 'Position',[.02,.05,.7,.85])
CC = chordChart(dataMat, 'rowName',rowName, 'colName',colName, 'Sep',1/80, 'LRadius',1.32);
CC = CC.draw();
% 修改上方方块颜色(Modify the color of the blocks above)
CListT = [0.49,0.64,0.53
0.75,0.39,0.35
0.80,0.74,0.42
0.40,0.55,0.66];
for i = 1:size(dataMat, 2)
CC.setSquareT_N(i, 'FaceColor',CListT(i,:))
end
% 修改下方方块颜色(Modify the color of the blocks below)
CListF = [0.91,0.91,0.97
0.62,0.95,0.66
0.91,0.61,0.20
0.54,0.45,0.82
0.99,0.76,0.81
0.91,0.85,0.83
0.53,0.42,0.43];
for i = 1:size(dataMat, 1)
CC.setSquareF_N(i, 'FaceColor',CListF(i,:))
end
% 修改弦颜色(Modify chord color)
for i = 1:size(dataMat, 1)
for j = 1:size(dataMat, 2)
CC.setChordMN(i,j, 'FaceColor',CListT(j,:), 'FaceAlpha',.46)
end
end
CC.tickState('on')
CC.tickLabelState('on')
CC.setFont('FontSize',17, 'FontName','Cambria')
CC.setTickFont('FontSize',8, 'FontName','Cambria')
% 绘制图例(Draw legend)
scatterHdl = scatter(10.*ones(size(dataMat,1)),10.*ones(size(dataMat,1)), ...
55, 'filled');
for i = 1:length(scatterHdl)
scatterHdl(i).CData = CListF(i,:);
end
lgdHdl = legend(scatterHdl, rowName, 'Location','best', 'FontSize',16, 'FontName','Cambria', 'Box','off');
set(lgdHdl, 'Position',[.77,.38,.1658,.27])
demo 14
rng(6)
dataMat = randi([1,20], [8,8]);
dataMat(dataMat > 5) = 0;
dataMat(1,:) = randi([1,15], [1,8]);
dataMat(1,8) = 40;
dataMat(8,8) = 60;
dataMat = dataMat./sum(sum(dataMat));
CList = [0.33,0.53,0.86
0.94,0.50,0.42
0.92,0.58,0.30
0.59,0.47,0.45
0.37,0.76,0.82
0.82,0.68,0.29
0.75,0.62,0.87
0.43,0.69,0.57];
NameList={'CHORD', 'CHART', 'AND', 'BICHORD',...
'CHART', 'MADE', 'BY', 'SLANDARER'};
figure('Units','normalized', 'Position',[.02,.05,.6,.85])
BCC = biChordChart(dataMat, 'Arrow','on', 'CData',CList, 'Sep',1/12, 'Label',NameList, 'LRadius',1.33);
BCC = BCC.draw();
% 添加刻度
BCC.tickState('on')
% 修改弦颜色(Modify chord color)
for i = 1:size(dataMat, 1)
for j = 1:size(dataMat, 2)
if dataMat(i,j) > 0
BCC.setChordMN(i,j, 'FaceAlpha',.7, 'EdgeColor',CList(i,:)./1.1)
end
end
end
% 修改方块颜色(Modify the color of the blocks)
for i = 1:size(dataMat, 1)
BCC.setSquareN(i, 'EdgeColor',CList(i,:)./1.7)
end
% 修改字体，字号及颜色
BCC.setFont('FontName','Cambria', 'FontSize',17)
BCC.tickLabelState('on')
BCC.setTickFont('FontName','Cambria', 'FontSize',9)
% 调整数值字符串格式
% Adjust numeric string format
BCC.setTickLabelFormat(@(x)[num2str(round(x*100)),'%'])
demo 15
CList = [0.81,0.72,0.83
0.69,0.82,0.89
0.17,0.44,0.64
0.70,0.85,0.55
0.03,0.57,0.13
0.97,0.67,0.64
0.84,0.09,0.12
1.00,0.80,0.46
0.98,0.52,0.01
];
figure('Units','normalized', 'Position',[.02,.05,.53,.85], 'Color',[1,1,1])
% =========================================================================
ax1 = axes('Parent',gcf, 'Position',[0,1/2,1/2,1/2]);
dataMat = rand([9,9]);
dataMat(dataMat > .4) = 0;
BCC = biChordChart(dataMat, 'Arrow','on', 'CData',CList);
BCC = BCC.draw();
BCC.tickState('on')
BCC.setFont('Visible','off')
% 修改弦颜色(Modify chord color)
for i = 1:size(dataMat, 1)
for j = 1:size(dataMat, 2)
if dataMat(i,j) > 0
BCC.setChordMN(i,j, 'FaceAlpha',.6)
end
end
end
text(-1.2,1.2, 'a', 'FontName','Times New Roman', 'FontSize',35)
% =========================================================================
ax2 = axes('Parent',gcf, 'Position',[1/2,1/2,1/2,1/2]);
dataMat = rand([9,9]);
dataMat(dataMat > .4) = 0;
dataMat = dataMat.*(1:9);
BCC = biChordChart(dataMat, 'Arrow','on', 'CData',CList);
BCC = BCC.draw();
BCC.tickState('on')
BCC.setFont('Visible','off')
% 修改弦颜色(Modify chord color)
for i = 1:size(dataMat, 1)
for j = 1:size(dataMat, 2)
if dataMat(i,j) > 0
BCC.setChordMN(i,j, 'FaceAlpha',.6)
end
end
end
text(-1.2,1.2, 'b', 'FontName','Times New Roman', 'FontSize',35)
% =========================================================================
ax3 = axes('Parent',gcf, 'Position',[0,0,1/2,1/2]);
dataMat = rand([9,9]);
dataMat(dataMat > .4) = 0;
dataMat = dataMat.*(1:9).';
BCC = biChordChart(dataMat, 'Arrow','on', 'CData',CList);
BCC = BCC.draw();
BCC.tickState('on')
BCC.setFont('Visible','off')
% 修改弦颜色(Modify chord color)
for i = 1:size(dataMat, 1)
for j = 1:size(dataMat, 2)
if dataMat(i,j) > 0
BCC.setChordMN(i,j, 'FaceAlpha',.6)
end
end
end
text(-1.2,1.2, 'c', 'FontName','Times New Roman', 'FontSize',35)
% =========================================================================
ax4 = axes('Parent',gcf, 'Position',[1/2,0,1/2,1/2]);
ax4.XColor = 'none'; ax4.YColor = 'none';
ax4.XLim = [-1,1]; ax4.YLim = [-1,1];
hold on
NameList = {'Food supply', 'Biodiversity', 'Water quality regulation', ...
'Air quality regulation', 'Erosion control', 'Carbon storage', ...
'Water retention', 'Recreation', 'Soil quality regulation'};
patchHdl = [];
for i = 1:size(dataMat, 2)
patchHdl(i) = fill([10,11,12],[10,13,13], CList(i,:), 'EdgeColor',[0,0,0]);
end
lgdHdl = legend(patchHdl, NameList, 'Location','best', 'FontSize',14, 'FontName','Cambria', 'Box','off');
lgdHdl.Position = [.625,.11,.255,.27];
lgdHdl.ItemTokenSize = [18,8];
demo 16
dataMat = rand([15,15]);
dataMat(dataMat > .2) = 0;
CList = [ 75,146,241; 252,180, 65; 224, 64, 10; 5,100,146; 191,191,191;
26, 59,105; 255,227,130; 18,156,221; 202,107, 75; 0, 92,219;
243,210,136; 80, 99,129; 241,185,168; 224,131, 10; 120,147,190]./255;
CListC = [54,69,92]./255;
CList = CList.*.6 + CListC.*.4;
figure('Units','normalized', 'Position',[.02,.05,.6,.85])
BCC = biChordChart(dataMat, 'Arrow','on', 'CData',CList);
BCC = BCC.draw();
% 添加刻度
BCC.tickState('on')
% 修改字体，字号及颜色
BCC.setFont('FontName','Cambria', 'FontSize',17, 'Color',[0,0,0])
% 修改弦颜色(Modify chord color)
for i = 1:size(dataMat, 1)
for j = 1:size(dataMat, 2)
if dataMat(i,j) > 0
BCC.setChordMN(i,j, 'FaceColor',CListC ,'FaceAlpha',.07)
end
end
end
[~, N] = max(sum(dataMat > 0, 2));
for j = 1:size(dataMat, 2)
BCC.setChordMN(N,j, 'FaceColor',CList(N,:) ,'FaceAlpha',.6)
end
You need to download following tools:
- - Chord chart: [chord chart](https://www.mathworks.com/matlabcentral/fileexchange/116550-chord-chart)
- - Directed graph chord chart: [digraph chord chart]:(https://www.mathworks.com/matlabcentral/fileexchange/121043-digraph-chord-chart)
What's the weather like in your place?
MatGPT was launched on March 22, 2023 and I am amazed at how many times it has been downloaded since then - close to 16,000 downloads in one year. When AI Chat Playground came out on MATLAB Central, I thought surely that people will stop using MatGPT. Boy I was wrong.
In early 2023 I was playing with the new shiny toy called ChatGPT like everyone else but instead of having it tell me jokes or haiku, I wanted to know how I can use it on MATLAB, and I started collecting the prompts that worked. Someone suggested I should turn that into an app, and MatGPT was born with help from other colleagues.
Here is the question - what should I do with it now? Some people suggested I could add other LLMs like Gemini or Claude, but I am more interested in learning how people actually use it.
If you are a MatGPT user, do you mind sharing how you use the app?
I feel like no one at UC San Diego knows this page, let alone this server, is still live. For the younger generation, this is what the whole internet used to look like :)
I was in a meeting the other day and a coworker shared a smiley face they created using the AI Chat Playground. The image looked something like this:
And I suspect the prompt they used was something like this:
"Create a smiley face"
I imagine this output wasn't what my coworker had expected so he was left thinking that this was as good as it gets without manually editing the code, and that the AI Chat Playground couldn't do any better.
I thought I could get a better result using the Playground so I tried a more detailed prompt using a multi-step technique like this:
"Follow these instructions:
- Create code that plots a circle
- Create two smaller circles as eyes within the first circle
- Create an arc that looks like a smile in the lower part of the first circle"
The output of this prompt was better in my opinion.
These queries/prompts are examples of 'zero-shot' prompts, the expectation being a good result with just one query. As opposed to a back-and-forth chat session working towards a desired outcome.
I wonder how many attempts everyone tries before they decide they can't anything more from the AI/LLM. There are times I'll send dozens of chat queries if I feel like I'm getting close to my goal, while other times I'll try just one or two. One thing I always find useful is seeing how others interact with AI models, which is what inspired me to share this.
Does anyone have examples of techniques that work well? I find multi-step instructions often produces good results.
The line integral 
, where C is the boundary of the square 
oriented counterclockwise, can be evaluated in two ways:
, where C is the boundary of the square oriented counterclockwise, can be evaluated in two ways: Using the definition of the line integral:
% Initialize the integral sum
integral_sum = 0;
% Segment C1: x = -1, y goes from -1 to 1
y = linspace(-1, 1);
x = -1 * ones(size(y));
dy = diff(y);
integral_sum = integral_sum + sum(-x(1:end-1) .* dy);
% Segment C2: y = 1, x goes from -1 to 1
x = linspace(-1, 1);
y = ones(size(x));
dx = diff(x);
integral_sum = integral_sum + sum(y(1:end-1).^2 .* dx);
% Segment C3: x = 1, y goes from 1 to -1
y = linspace(1, -1);
x = ones(size(y));
dy = diff(y);
integral_sum = integral_sum + sum(-x(1:end-1) .* dy);
% Segment C4: y = -1, x goes from 1 to -1
x = linspace(1, -1);
y = -1 * ones(size(x));
dx = diff(x);
integral_sum = integral_sum + sum(y(1:end-1).^2 .* dx);
disp(['Direct Method Integral: ', num2str(integral_sum)]);
Plotting the square path
% Define the square's vertices
vertices = [-1 -1; -1 1; 1 1; 1 -1; -1 -1];
% Plot the square
figure;
plot(vertices(:,1), vertices(:,2), '-o');
title('Square Path for Line Integral');
xlabel('x');
ylabel('y');
grid on;
axis equal;
% Add arrows to indicate the path direction (counterclockwise)
hold on;
for i = 1:size(vertices,1)-1
% Calculate direction
dx = vertices(i+1,1) - vertices(i,1);
dy = vertices(i+1,2) - vertices(i,2);
% Reduce the length of the arrow for better visibility
scale = 0.2;
dx = scale * dx;
dy = scale * dy;
% Calculate the start point of the arrow
startx = vertices(i,1) + (1 - scale) * dx;
starty = vertices(i,2) + (1 - scale) * dy;
% Plot the arrow
quiver(startx, starty, dx, dy, 'MaxHeadSize', 0.5, 'Color', 'r', 'AutoScale', 'off');
end
hold off;
Apply Green's Theorem for the line integral
% Define the partial derivatives of P and Q
f = @(x, y) -1 - 2*y; % derivative of -x with respect to x is -1, and derivative of y^2 with respect to y is 2y
% Compute the double integral over the square [-1,1]x[-1,1]
integral_value = integral2(f, -1, 1, 1, -1);
disp(['Green''s Theorem Integral: ', num2str(integral_value)]);
Plotting the vector field related to Green’s theorem
% Define the grid for the vector field
[x, y] = meshgrid(linspace(-2, 2, 20), linspace(-2 ,2, 20));
% Define the vector field components
P = y.^2; % y^2 component
Q = -x; % -x component
% Plot the vector field
figure;
quiver(x, y, P, Q, 'b');
hold on; % Hold on to plot the square on the same figure
% Define the square's vertices
vertices = [-1 -1; -1 1; 1 1; 1 -1; -1 -1];
% Plot the square path
plot(vertices(:,1), vertices(:,2), '-o', 'Color', 'k'); % 'k' for black color
title('Vector Field (P = y^2, Q = -x) with Square Path');
xlabel('x');
ylabel('y');
axis equal;
% Add arrows to indicate the path direction (counterclockwise)
for i = 1:size(vertices,1)-1
% Calculate direction
dx = vertices(i+1,1) - vertices(i,1);
dy = vertices(i+1,2) - vertices(i,2);
% Reduce the length of the arrow for better visibility
scale = 0.2;
dx = scale * dx;
dy = scale * dy;
% Calculate the start point of the arrow
startx = vertices(i,1) + (1 - scale) * dx;
starty = vertices(i,2) + (1 - scale) * dy;
% Plot the arrow
quiver(startx, starty, dx, dy, 'MaxHeadSize', 0.5, 'Color', 'r', 'AutoScale', 'off');
end
hold off;
To solve a surface integral for example the
over the sphere 
easily in MATLAB, you can leverage the symbolic toolbox for a direct and clear solution. Here is a tip to simplify the process:
over the sphere easily in MATLAB, you can leverage the symbolic toolbox for a direct and clear solution. Here is a tip to simplify the process:- Use Symbolic Variables and Functions: Define your variables symbolically, including the parameters of your spherical coordinates θ and ϕ and the radius r . This allows MATLAB to handle the expressions symbolically, making it easier to manipulate and integrate them.
- Express in Spherical Coordinates Directly: Since you already know the sphere's equation and the relationship in spherical coordinates, define x, y, and z in terms of r , θ and ϕ directly.
- Perform Symbolic Integration: Use MATLAB's `int` function to integrate symbolically. Since the sphere and the function
are symmetric, you can exploit these symmetries to simplify the calculation.
Here’s how you can apply this tip in MATLAB code:
% Include the symbolic math toolbox
syms theta phi
% Define the limits for theta and phi
theta_limits = [0, pi];
phi_limits = [0, 2*pi];
% Define the integrand function symbolically
integrand = 16 * sin(theta)^3 * cos(phi)^2;
% Perform the symbolic integral for the surface integral
surface_integral = int(int(integrand, theta, theta_limits(1), theta_limits(2)), phi, phi_limits(1), phi_limits(2));
% Display the result of the surface integral symbolically
disp(['The surface integral of x^2 over the sphere is ', char(surface_integral)]);
% Number of points for plotting
num_points = 100;
% Define theta and phi for the sphere's surface
[theta_mesh, phi_mesh] = meshgrid(linspace(double(theta_limits(1)), double(theta_limits(2)), num_points), ...
linspace(double(phi_limits(1)), double(phi_limits(2)), num_points));
% Spherical to Cartesian conversion for plotting
r = 2; % radius of the sphere
x = r * sin(theta_mesh) .* cos(phi_mesh);
y = r * sin(theta_mesh) .* sin(phi_mesh);
z = r * cos(theta_mesh);
% Plot the sphere
figure;
surf(x, y, z, 'FaceColor', 'interp', 'EdgeColor', 'none');
colormap('jet'); % Color scheme
shading interp; % Smooth shading
camlight headlight; % Add headlight-type lighting
lighting gouraud; % Use Gouraud shading for smooth color transitions
title('Sphere: x^2 + y^2 + z^2 = 4');
xlabel('x-axis');
ylabel('y-axis');
zlabel('z-axis');
colorbar; % Add color bar to indicate height values
axis square; % Maintain aspect ratio to be square
view([-30, 20]); % Set a nice viewing angle
I am often talking to new MATLAB users. I have put together one script. If you know how this script works, why, and what each line means, you will be well on your way on your MATLAB learning journey.
% Clear existing variables and close figures
clear;
close all;
% Print to the Command Window
disp('Hello, welcome to MATLAB!');
% Create a simple vector and matrix
vector = [1, 2, 3, 4, 5];
matrix = [1, 2, 3; 4, 5, 6; 7, 8, 9];
% Display the created vector and matrix
disp('Created vector:');
disp(vector);
disp('Created matrix:');
disp(matrix);
% Perform element-wise multiplication
result = vector .* 2;
% Display the result of the operation
disp('Result of element-wise multiplication of the vector by 2:');
disp(result);
% Create plot
x = 0:0.1:2*pi; % Generate values from 0 to 2*pi
y = sin(x); % Calculate the sine of these values
% Plotting
figure; % Create a new figure window
plot(x, y); % Plot x vs. y
title('Simple Plot of sin(x)'); % Give the plot a title
xlabel('x'); % Label the x-axis
ylabel('sin(x)'); % Label the y-axis
grid on; % Turn on the grid
disp('This is the end of the script. Explore MATLAB further to learn more!');
In one line of MATLAB code, compute how far you can see at the seashore. In otherwords, how far away is the horizon from your eyes? You can assume you know your height and the diameter or radius of the earth.
Keep calm and study PDEs
Me at the beginning of every meeting
A bit late. Compliments to Chris for sharing.
can you relate?
Happy Pi Day!
3.14 π Day has arrived, and this post provides some very cool pi implementations and complete MATLAB code.
Firstly, in order to obtain the first n decimal places of pi, we need to write the following code (to prevent inaccuracies, we need to take a few more tails and perform another operation of taking the first n decimal places when needed):
function Pi=getPi(n)
if nargin<1,n=3;end
Pi=char(vpa(sym(pi),n+10));
Pi=abs(Pi)-48;
Pi=Pi(3:n+2);
end
With this function to obtain the decimal places of pi, our visualization journey has begun~Step by step, from simple to complex~(Please try to use newer versions of MATLAB to run, at least R17b)
1 Pie chart
Just calculate the proportion of each digit to the first 1500 decimal places:
% 获取pi前1500位小数
Pi=getPi(1500);
% 统计各个数字出现次数
numNum=find([diff(sort(Pi)),1]);
numNum=[numNum(1),diff(numNum)];
% 配色列表
CM=[20,164,199;43,187,170;53,165,81;189,190,28;248,167,22;
232,74,27;244,57,99;240,118,177;168,109,195;78,125,187]./255;
% 绘图并修饰
pieHdl=pie(numNum);
set(gcf,'Color',[1,1,1],'Position',[200,100,620,620]);
for i=1:2:20
pieHdl(i).EdgeColor=[1,1,1];
pieHdl(i).LineWidth=1;
pieHdl(i).FaceColor=CM((i+1)/2,:);
end
for i=2:2:20
pieHdl(i).Color=CM(i/2,:);
pieHdl(i).FontWeight='bold';
pieHdl(i).FontSize=14;
end
% 绘制图例并修饰
lgdHdl=legend(num2cell('0123456789'));
lgdHdl.FontWeight='bold';
lgdHdl.FontSize=11;
lgdHdl.TextColor=[.5,.5,.5];
lgdHdl.Location='southoutside';
lgdHdl.Box='off';
lgdHdl.NumColumns=10;
lgdHdl.ItemTokenSize=[20,15];
title("VISUALIZING \pi 'Pi' Chart | 1500 digits",'FontSize',18,...
'FontName','Times New Roman','Color',[.5,.5,.5])
2 line chart
Calculate the change in the proportion of each number:
% 获取pi前1500位小数
Pi=getPi(1500);
% 计算比例变化
Ratio=cumsum(Pi==(0:9)',2);
Ratio=Ratio./sum(Ratio);
D=1:length(Ratio);
% 配色列表
CM=[20,164,199;43,187,170;53,165,81;189,190,28;248,167,22;
232,74,27;244,57,99;240,118,177;168,109,195;78,125,187]./255;
hold on
% 循环绘图
for i=1:10
plot(D(20:end),Ratio(i,20:end),'Color',[CM(i,:),.6],'LineWidth',1.8)
end
% 坐标区域修饰
ax=gca;box on;grid on
ax.YLim=[0,.2];
ax.YTick=0:.05:.2;
ax.XTick=0:200:1400;
ax.YTickLabel={'0%','5%','10%','15%','20%'};
ax.XMinorTick='on';
ax.YMinorTick='on';
ax.LineWidth=.8;
ax.GridLineStyle='-.';
ax.FontName='Cambria';
ax.FontSize=11;
ax.XLabel.String='Decimals';
ax.YLabel.String='Proportion';
ax.XLabel.FontSize=13;
ax.YLabel.FontSize=13;
% 绘制图例并修饰
lgdHdl=legend(num2cell('0123456789'));
lgdHdl.NumColumns=5;
lgdHdl.FontWeight='bold';
lgdHdl.FontSize=11;
lgdHdl.TextColor=[.5,.5,.5];
3 stacked area diagram
% 获取pi前500位小数
Pi=getPi(500);
% 计算比例变化
Ratio=cumsum(Pi==(0:9)',2);
Ratio=Ratio./sum(Ratio);
% 配色列表
CM=[231,98,84;239,138,71;247,170,88;255,208,111;255,230,183;
170,220,224;114,188,213;82,143,173;55,103,149;30,70,110]./255;
% 绘制堆叠面积图
hold on
areaHdl=area(Ratio');
for i=1:10
areaHdl(i).FaceColor=CM(i,:);
areaHdl(i).FaceAlpha=.9;
end
% 图窗和坐标区域修饰
set(gcf,'Position',[200,100,720,420]);
ax=gca;
ax.YLim=[0,1];
ax.XMinorTick='on';
ax.YMinorTick='on';
ax.LineWidth=.8;
ax.FontName='Cambria';
ax.FontSize=11;
ax.TickDir='out';
ax.XLabel.String='Decimals';
ax.YLabel.String='Proportion';
ax.XLabel.FontSize=13;
ax.YLabel.FontSize=13;
ax.Title.String='Area Chart of Proportion — 500 digits';
ax.Title.FontSize=14;
% 绘制图例并修饰
lgdHdl=legend(num2cell('0123456789'));
lgdHdl.NumColumns=5;
lgdHdl.FontSize=11;
lgdHdl.Location='southeast';
4 connected stacked bar chart
% 获取pi前100位小数
Pi=getPi(100);
% 计算比例变化
Ratio=cumsum(Pi==(0:9)',2);
Ratio=Ratio./sum(Ratio);
X=Ratio(:,10:10:80)';
barHdl=bar(X,'stacked','BarWidth',.2);
CM=[231,98,84;239,138,71;247,170,88;255,208,111;255,230,183;
170,220,224;114,188,213;82,143,173;55,103,149;30,70,110]./255;
for i=1:10
barHdl(i).FaceColor=CM(i,:);
end
% 以下是生成连接的部分
hold on;axis tight
yEndPoints=reshape([barHdl.YEndPoints]',length(barHdl(1).YData),[])';
zeros(1,length(barHdl(1).YData));
yEndPoints=[zeros(1,length(barHdl(1).YData));yEndPoints];
barWidth=barHdl(1).BarWidth;
for i=1:length(barHdl)
for j=1:length(barHdl(1).YData)-1
y1=min(yEndPoints(i,j),yEndPoints(i+1,j));
y2=max(yEndPoints(i,j),yEndPoints(i+1,j));
if y1*y2<0
ty=yEndPoints(find(yEndPoints(i+1,j)*yEndPoints(1:i,j)>=0,1,'last'),j);
y1=min(ty,yEndPoints(i+1,j));
y2=max(ty,yEndPoints(i+1,j));
end
y3=min(yEndPoints(i,j+1),yEndPoints(i+1,j+1));
y4=max(yEndPoints(i,j+1),yEndPoints(i+1,j+1));
if y3*y4<0
ty=yEndPoints(find(yEndPoints(i+1,j+1)*yEndPoints(1:i,j+1)>=0,1,'last'),j+1);
y3=min(ty,yEndPoints(i+1,j+1));
y4=max(ty,yEndPoints(i+1,j+1));
end
fill([j+.5.*barWidth,j+1-.5.*barWidth,j+1-.5.*barWidth,j+.5.*barWidth],...
[y1,y3,y4,y2],barHdl(i).FaceColor,'FaceAlpha',.4,'EdgeColor','none');
end
end
% 图窗和坐标区域修饰
set(gcf,'Position',[200,100,720,420]);
ax=gca;box off
ax.YLim=[0,1];
ax.XMinorTick='on';
ax.YMinorTick='on';
ax.LineWidth=.8;
ax.FontName='Cambria';
ax.FontSize=11;
ax.TickDir='out';
ax.XTickLabel={'10','20','30','40','50','60','70','80'};
ax.XLabel.String='Decimals';
ax.YLabel.String='Proportion';
ax.XLabel.FontSize=13;
ax.YLabel.FontSize=13;
ax.Title.String='Area Chart of Proportion — 10-80 digits';
ax.Title.FontSize=14;
% 绘制图例并修饰
lgdHdl=legend(barHdl,num2cell('0123456789'));
lgdHdl.NumColumns=5;
lgdHdl.FontSize=11;
lgdHdl.Location='southeast';
5 bichord chart
Need to use this tool:
% 构建连接矩阵
dataMat=zeros(10,10);
Pi=getPi(1001);
for i=1:1000
dataMat(Pi(i)+1,Pi(i+1)+1)=dataMat(Pi(i)+1,Pi(i+1)+1)+1;
end
BCC=biChordChart(dataMat,'Arrow','on','Label',num2cell('0123456789'));
BCC=BCC.draw();
% 添加刻度
BCC.tickState('on')
% 修改字体，字号及颜色
BCC.setFont('FontName','Cambria','FontSize',17)
set(gcf,'Position',[200,100,820,820]);
6 Gravity simulation diagram
Imagine each decimal as a small ball with a mass of
For example, if
, the weight of ball 0 is 1, ball 9 is 1.2589, the initial velocity of the ball is 0, and it is attracted by other balls. Gravity follows the inverse square law, and if the balls are close enough, they will collide and their value will become 
, the weight of ball 0 is 1, ball 9 is 1.2589, the initial velocity of the ball is 0, and it is attracted by other balls. Gravity follows the inverse square law, and if the balls are close enough, they will collide and their value will become After adding, take the mod, add the velocity direction proportionally, and recalculate the weight.
Pi=[3,getPi(71)];K=.18;
% 基础配置
CM=[239,32,120;239,60,52;247,98,32;255,182,60;247,235,44;
142,199,57;55,180,70;0,170,239;40,56,146;147,37,139]./255;
T=linspace(0,2*pi,length(Pi)+1)';
T=T(1:end-1);
ct=linspace(0,2*pi,100);
cx=cos(ct).*.027;
cy=sin(ct).*.027;
% 初始数据
Pi=Pi(:);
N=Pi;
X=cos(T);Y=sin(T);
VX=T.*0;VY=T.*0;
PX=X;PY=Y;
% 未碰撞时初始质量
getM=@(x)(x+1).^K;
M=getM(N);
% 绘制初始圆圈
hold on
for i=1:length(N)
fill(cx+X(i),cy+Y(i),CM(N(i)+1,:),'EdgeColor','w','LineWidth',1)
end
for k=1:800
% 计算加速度
Rn2=1./squareform(pdist([X,Y])).^2;
Rn2(eye(length(X))==1)=0;
MRn2=Rn2.*(M');
AX=X'-X;AY=Y'-Y;
normXY=sqrt(AX.^2+AY.^2);
AX=AX./normXY;AX(eye(length(X))==1)=0;
AY=AY./normXY;AY(eye(length(X))==1)=0;
AX=sum(AX.*MRn2,2)./150000;
AY=sum(AY.*MRn2,2)./150000;
% 计算速度及新位置
VX=VX+AX;X=X+VX;PX=[PX,X];
VY=VY+AY;Y=Y+VY;PY=[PY,Y];
% 检测是否有碰撞
R=squareform(pdist([X,Y]));
R(triu(ones(length(X)))==1)=inf;
[row,col]=find(R<=0.04);
if length(X)==1
break;
end
if ~isempty(row)
% 碰撞的点合为一体
XC=(X(row)+X(col))./2;YC=(Y(row)+Y(col))./2;
VXC=(VX(row).*M(row)+VX(col).*M(col))./(M(row)+M(col));
VYC=(VY(row).*M(row)+VY(col).*M(col))./(M(row)+M(col));
PC=nan(length(row),size(PX,2));
NC=mod(N(row)+N(col),10);
% 删除碰撞点并绘图
uniNum=unique([row;col]);
X(uniNum)=[];VX(uniNum)=[];
Y(uniNum)=[];VY(uniNum)=[];
for i=1:length(uniNum)
plot(PX(uniNum(i),:),PY(uniNum(i),:),'LineWidth',2,'Color',CM(N(uniNum(i))+1,:))
end
PX(uniNum,:)=[];PY(uniNum,:)=[];N(uniNum,:)=[];
% 绘制圆形
for i=1:length(XC)
fill(cx+XC(i),cy+YC(i),CM(NC(i)+1,:),'EdgeColor','w','LineWidth',1)
end
% 补充合体点
X=[X;XC];Y=[Y;YC];VX=[VX;VXC];VY=[VY;VYC];
PX=[PX;PC];PY=[PY;PC];N=[N;NC];M=getM(N);
end
end
for i=1:size(PX,1)
plot(PX(i,:),PY(i,:),'LineWidth',2,'Color',CM(N(i)+1,:))
end
text(-1,1,{['Num=',num2str(length(Pi))];['K=',num2str(K)]},'FontSize',13,'FontName','Cambria')
% 图窗及坐标区域修饰
set(gcf,'Position',[200,100,820,820]);
ax=gca;
ax.Position=[0,0,1,1];
ax.DataAspectRatio=[1,1,1];
ax.XLim=[-1.1,1.1];
ax.YLim=[-1.1,1.1];
ax.XTick=[];
ax.YTick=[];
ax.XColor='none';
ax.YColor='none';
7 forest chart
The method comes from
The digits of π are shown as a forest. Each tree in the forest represents the digits of π up to the next 9. The first 10 trees are "grown" from the digit sets 314159, 2653589, 79, 3238462643383279, 50288419, 7169, 39, 9, 3751058209, and 749.
BRANCHES
The first digit of a tree controls how many branches grow from the trunk of the tree. For example, the first tree's first digit is 3, so you see 3 branches growing from the trunk.
The next digit's branches grow from the end of a branch of the previous digit in left-to-right order. This process continues until all the tree's digits have been used up.
Each tree grows from a set of consecutive digits sampled from the digits of π up to the next 9. The first tree, shown here, grows from 314159. Each of the digits determine how many branches grow at each fork in the tree — the branches here are colored by their corresponding digit to illustrate this. Leaves encode the digits in a left-to-right order. The digit 9 spawns a flower on one of the branches of the previous digit. The branching exception is 0, which terminates the current branch — 0 branches grow!
LEAVES AND FLOWERS
The tree's digits themselves are drawn as circular leaves, color-coded by the digit.
The leaf exception is 9, which causes one of the branches of the previous digit to sprout a flower! The petals of the flower are colored by the digit before the 9 and the center is colored by the digit after the 9, which is on the next tree. This is how the forest propagates.
The colors of a flower are determined by the first digit of the next tree and the penultimate digit of the current tree. If the current tree only has one digit, then that digit is used. Leaves are placed at the tips of branches in a left-to-right order — you can "easily" read them off. Additionally, the leaves are distributed within the tree (without disturbing their left-to-right order) to spread them out as much as possible and avoid overlap. This order is deterministic.
The leaf placement exception are the branch set that sprouted the flower. These are not used to grow leaves — the flower needs space!
function PiTree(X,pos,D)
lw=2;
theta=pi/2+(rand(1)-.5).*pi./12;
% 树叶及花朵颜色
CM=[237,32,121;237,62,54;247,99,33;255,183,59;245,236,43;
141,196,63;57,178,74;0,171,238;40,56,145;146,39,139]./255;
hold on
if all(X(1:end-2)==0)
endSet=[pos,pos,theta];
else
kplot(pos(1)+[0,cos(theta)],pos(2)+[0,sin(theta)],lw./.6)
endSet=[pos,pos+[cos(theta),sin(theta)],theta];
% 计算层级
Layer=0;
for i=1:length(X)
Layer=[Layer,ones(1,X(i)).*i];
end
% 计算树枝
if D
for i=1:length(X)-2
if X(i)==0 % 若数值为0则不长树枝
newSet=endSet(1,:);
elseif X(i)==1 % 若数值为1则一长一短两个树枝
tTheta=endSet(1,5);
tTheta=linspace(tTheta+pi/8,tTheta-pi/8,2)'+(rand([2,1])-.5).*pi./8;
newSet=repmat(endSet(1,3:4),[X(i),1]);
newSet=[newSet.*[1;1],newSet+[cos(tTheta),sin(tTheta)].*.7^Layer(i).*[1;.1],tTheta];
else % 其他情况数值为几长几个树枝
tTheta=endSet(1,5);
tTheta=linspace(tTheta+pi/5,tTheta-pi/5,X(i))'+(rand([X(i),1])-.5).*pi./8;
newSet=repmat(endSet(1,3:4),[X(i),1]);
newSet=[newSet,newSet+[cos(tTheta),sin(tTheta)].*.7^Layer(i),tTheta];
end
% 绘制树枝
for j=1:size(newSet,1)
kplot(newSet(j,[1,3]),newSet(j,[2,4]),lw.*.6^Layer(i))
end
endSet=[endSet;newSet];
endSet(1,:)=[];
end
end
end
% 计算叶子和花朵位置
FLSet=endSet(:,3:4);
[~,FLInd]=sort(FLSet(:,1));
FLSet=FLSet(FLInd,:);
[~,tempInd]=sort(rand([1,size(FLSet,1)]));
tempInd=sort(tempInd(1:length(X)-2));
flowerInd=tempInd(randi([1,length(X)-2],[1,1]));
leafInd=tempInd(tempInd~=flowerInd);
% 绘制树叶
for i=1:length(leafInd)
scatter(FLSet(leafInd(i),1),FLSet(leafInd(i),2),70,'filled','CData',CM(X(i)+1,:))
end
% 绘制花朵
for i=1:5
% if ~D
% tC=CM(X(end)+1,:);
% else
% tC=CM(X(end-2)+1,:);
% end
scatter(FLSet(flowerInd,1)+cos(pi*2*i/5).*.18,FLSet(flowerInd,2)+sin(pi*2*i/5).*.18,60,...
'filled','CData',CM(X(end-2)+1,:),'MarkerEdgeColor',[1,1,1])
end
scatter(FLSet(flowerInd,1),FLSet(flowerInd,2),60,'filled','CData',CM(X(end)+1,:),'MarkerEdgeColor',[1,1,1])
drawnow;%axis tight
% =========================================================================
function kplot(XX,YY,LW,varargin)
LW=linspace(LW,LW*.6,10);%+rand(1,20).*LW./10;
XX=linspace(XX(1),XX(2),11)';
XX=[XX(1:end-1),XX(2:end)];
YY=linspace(YY(1),YY(2),11)';
YY=[YY(1:end-1),YY(2:end)];
for ii=1:10
plot(XX(ii,:),YY(ii,:),'LineWidth',LW(ii),'Color',[.1,.1,.1])
end
end
end
main part:
Pi=[3,getPi(800)];
pos9=[0,find(Pi==9)];
set(gcf,'Position',[200,50,900,900],'Color',[1,1,1]);
ax=gca;hold on
ax.Position=[0,0,1,1];
ax.DataAspectRatio=[1,1,1];
ax.XLim=[.5,36];
ax.XTick=[];
ax.YTick=[];
ax.XColor='none';
ax.YColor='none';
for j=1:8
for i=1:11
n=i+(j-1)*11;
if n<=85
tPi=Pi((pos9(n)+1):pos9(n+1)+1);
if length(tPi)>2
PiTree(tPi,[0+i*3,0-j*4],true);
else
PiTree([Pi(pos9(n)),tPi],[0+i*3,0-j*4],false);
end
end
end
end
8 random walk
n=1200;
% 获取pi前n位小数
Pi=getPi(n);
CM=[239,65,75;230,115,48;229,158,57;232,136,85;239,199,97;
144,180,116;78,166,136;81,140,136;90,118,142;43,121,159]./255;
hold on
endPoint=[0,0];
t=linspace(0,2*pi,100);
T=linspace(0,2*pi,11)+pi/2;
fill(endPoint(1)+cos(t).*.5,endPoint(2)+sin(t).*.5,CM(Pi(1)+1,:),'EdgeColor','none')
for i=1:n
theta=T(Pi(i)+1);
plot(endPoint(1)+[0,cos(theta)],endPoint(2)+[0,sin(theta)],'Color',[CM(Pi(i)+1,:),.8],'LineWidth',1.2);
endPoint=endPoint+[cos(theta),sin(theta)];
end
fill(endPoint(1)+cos(t).*.5,endPoint(2)+sin(t).*.5,CM(Pi(n)+1,:),'EdgeColor','none')
% 图窗和坐标区域修饰
set(gcf,'Position',[200,100,820,820]);
ax=gca;
ax.XTick=[];
ax.YTick=[];
ax.Color=[0,0,0];
ax.DataAspectRatio=[1,1,1];
ax.XLim=[-30,5];
ax.YLim=[-5,40];
% 绘制图例
endPoint=[1,35];
for i=1:10
theta=T(i);
plot(endPoint(1)+[0,cos(theta).*2],endPoint(2)+[0,sin(theta).*2],'Color',[CM(i,:),.8],'LineWidth',3);
text(endPoint(1)+cos(theta).*2.7,endPoint(2)+sin(theta).*2.7,num2str(i-1),'Color',[1,1,1].*.7,...
'FontSize',12,'FontWeight','bold','FontName','Cambria','HorizontalAlignment','center')
end
text(-15,35,'Random walk of \pi digits','Color',[1,1,1],'FontName','Cambria',...
'HorizontalAlignment','center','FontSize',25,'FontAngle','italic')
9 grid chart
Pi=[3,getPi(399)];
% 配色数据
CM=[248,65,69;246,152,36;249,198,81;67,170,139;87,118,146]./255;
% 绘制圆圈
hold on
t=linspace(0,2*pi,100);
x=cos(t).*.8.*.5;
y=sin(t).*.8.*.5;
for i=1:400
[col,row]=ind2sub([20,20],i);
if mod(Pi(i),2)==0
fill(x+col,y+row,CM(round((Pi(i)+1)/2),:),'LineWidth',1,'EdgeAlpha',.8)
else
fill(x+col,y+row,[0,0,0],'EdgeColor',CM(round((Pi(i)+1)/2),:),'LineWidth',1,'EdgeAlpha',.7)
end
end
text(10.5,-.4,'\pi on a grid — 400 digits','Color',[1,1,1],'FontName','Cambria',...
'HorizontalAlignment','center','FontSize',25,'FontAngle','italic')
% 图窗和坐标区域修饰
set(gcf,'Position',[200,100,820,820]);
ax=gca;
ax.YDir='reverse';
ax.XLim=[.5,20.5];
ax.YLim=[-1,20.5];
ax.XTick=[];
ax.YTick=[];
ax.Color=[0,0,0];
ax.DataAspectRatio=[1,1,1];
10 scale grid diagram
Let's still put the numbers in the form of circles, but the difference is that six numbers are grouped together, and the pure purple circle at the end is the six 9s that we are familiar with decimal places 762-767
Pi=[3,getPi(767)];
% 762-767
% 配色数据
CM=[239,32,120;239,60,52;247,98,32;255,182,60;247,235,44;
142,199,57;55,180,70;0,170,239;40,56,146;147,37,139]./255;
% 绘制圆圈
hold on
t=linspace(0,2*pi,100);
x=cos(t).*.9.*.5;
y=sin(t).*.9.*.5;
for i=1:6:length(Pi)
n=round((i-1)/6+1);
[col,row]=ind2sub([10,13],n);
tNum=Pi(i:i+5);
numNum=find([diff(sort(tNum)),1]);
numNum=[numNum(1),diff(numNum)];
cumNum=cumsum(numNum);
uniNum=unique(tNum);
for j=length(cumNum):-1:1
fill(x./6.*cumNum(j)+col,y./6.*cumNum(j)+row,CM(uniNum(j)+1,:),'EdgeColor','none')
end
end
% 绘制图例
for i=1:10
fill(x./4+5.5+(i-5.5)*.32,y./4+14.5,CM(i,:),'EdgeColor','none')
text(5.5+(i-5.5)*.32,14.9,num2str(i-1),'Color',[1,1,1],'FontSize',...
9,'FontName','Cambria','HorizontalAlignment','center')
end
text(5.5,-.2,'FEYNMAN POINT of \pi','Color',[1,1,1],'FontName','Cambria',...
'HorizontalAlignment','center','FontSize',25,'FontAngle','italic')
% 图窗和坐标区域修饰
set(gcf,'Position',[200,100,600,820]);
ax=gca;
ax.YDir='reverse';
ax.Position=[0,0,1,1];
ax.XLim=[.3,10.7];
ax.YLim=[-1,15.5];
ax.XTick=[];
ax.YTick=[];
ax.Color=[0,0,0];
ax.DataAspectRatio=[1,1,1];
11 text chart
First, write a code to generate an image of each letter:
function getLogo
if ~exist('image','dir')
mkdir('image\')
end
logoSet=['.',char(65:90)];
for i=1:27
figure();
ax=gca;
ax.XLim=[-1,1];
ax.YLim=[-1,1];
ax.XColor='none';
ax.YColor='none';
ax.DataAspectRatio=[1,1,1];
logo=logoSet(i);
hold on
text(0,0,logo,'HorizontalAlignment','center','FontSize',320,'FontName','Segoe UI Black')
exportgraphics(ax,['image\',logo,'.png'])
close
end
dotPic=imread('image\..png');
newDotPic=uint8(ones([400,size(dotPic,2),3]).*255);
newDotPic(end-size(dotPic,1)+1:end,:,1)=dotPic(:,:,1);
newDotPic(end-size(dotPic,1)+1:end,:,2)=dotPic(:,:,2);
newDotPic(end-size(dotPic,1)+1:end,:,3)=dotPic(:,:,3);
imwrite(newDotPic,'image\..png')
S=20;
for i=1:27
logo=logoSet(i);
tPic=imread(['image\',logo,'.png']);
sz=size(tPic,[1,2]);
sz=round(sz./sz(1).*400);
tPic=imresize(tPic,sz);
tBox=uint8(255.*ones(size(tPic,[1,2])+S));
tBox(S+1:S+size(tPic,1),S+1:S+size(tPic,2))=tPic(:,:,1);
imwrite(cat(3,tBox,tBox,tBox),['image\',logo,'.png'])
end
end
Pi=[3,-1,getPi(150)];
CM=[109,110,113;224,25,33;244,126,26;253,207,2;154,203,57;111,150,124;
121,192,235;6,109,183;190,168,209;151,118,181;233,93,163]./255;
ST={'.','ZERO','ONE','TWO','THREE','FOUR','FIVE','SIX','SEVEN','EIGHT','NINE'};
n=1;
hold on
% 循环绘制字母
for i=1:20%:10
STList='';
NMList=[];
PicListR=uint8(zeros(400,0));
PicListG=uint8(zeros(400,0));
PicListB=uint8(zeros(400,0));
% PicListA=uint8(zeros(400,0));
for j=1:6
STList=[STList,ST{Pi(n)+2}];
NMList=[NMList,ones(size(ST{Pi(n)+2})).*(Pi(n)+2)];
n=n+1;
if length(STList)>15&&length(STList)+length(ST{Pi(n)+2})>20
break;
end
end
for k=1:length(STList)
tPic=imread(['image\',STList(k),'.png']);
% PicListA=[PicListA,tPic(:,:,1)];
PicListR=[PicListR,(255-tPic(:,:,1)).*CM(NMList(k),1)];
PicListG=[PicListG,(255-tPic(:,:,2)).*CM(NMList(k),2)];
PicListB=[PicListB,(255-tPic(:,:,3)).*CM(NMList(k),3)];
end
PicList=cat(3,PicListR,PicListG,PicListB);
image([-1200,1200],[0,150]-(i-1)*150,flipud(PicList))
end
% 图窗及坐标区域修饰
set(gcf,'Position',[200,100,600,820]);
ax=gca;
ax.DataAspectRatio=[1,1,1];
ax.XLim=[-1300,1300];
ax.Position=[0,0,1,1];
ax.XTick=[];
ax.YTick=[];
ax.Color=[0,0,0];
ax.YLim=[-19*150-80,230];
12 spiral chart
Pi=getPi(600);
% 配色列表
CM=[78,121,167;242,142,43;225,87,89;118,183,178;89,161,79;
237,201,72;176,122,161;255,157,167;156,117,95;186,176,172]./255;
% 绘制圆圈
hold on
t=linspace(0,2*pi,100);
x=cos(t).*.8;
y=sin(t).*.8;
for i=1:600
X=i.*cos(i./10)./10;
Y=i.*sin(i./10)./10;
fill(X+x,Y+y,CM(Pi(i)+1,:),'EdgeColor','none','FaceAlpha',.9)
end
text(0,65,'The Circle of \pi','Color',[1,1,1],'FontName','Cambria',...
'HorizontalAlignment','center','FontSize',25,'FontAngle','italic')
% 图窗和坐标区域修饰
set(gcf,'Position',[200,100,820,820]);
ax=gca;
ax.XLim=[-60,60];
ax.YLim=[-60,70];
ax.XTick=[];
ax.YTick=[];
ax.Color=[0,0,0];
ax.DataAspectRatio=[1,1,1];
13 Archimedean spiral diagram
a=1;b=.227;
Pi=getPi(500);
% 配色列表
CM=[78,121,167;242,142,43;225,87,89;118,183,178;89,161,79;
237,201,72;176,122,161;255,157,167;156,117,95;186,176,172]./255;
% 绘制圆圈
hold on
T=0;R=1;
t=linspace(0,2*pi,100);
x=cos(t).*.7;
y=sin(t).*.7;
for i=1:500
X=R.*cos(T);Y=R.*sin(T);
fill(X+x,Y+y,CM(Pi(i)+1,:),'EdgeColor','none','FaceAlpha',.9)
T=T+1./R.*1.4;
R=a+b*T;
end
text(17.25,22,{'The Archimedes spiral of \pi';'—— 500 digits'},...
'Color',[1,1,1],'FontName','Cambria',...
'HorizontalAlignment','right','FontSize',25,'FontAngle','italic')
% 图窗和坐标区域修饰
set(gcf,'Position',[200,100,820,820]);
ax=gca;
ax.XLim=[-19,18.5];
ax.YLim=[-20,25];
ax.XTick=[];
ax.YTick=[];
ax.Color=[0,0,0];
ax.DataAspectRatio=[1,1,1];
14 proportional Archimedean spiral diagram
Pi=[3,getPi(1199)];
% 配色数据
CM=[239,32,120;239,60,52;247,98,32;255,182,60;247,235,44;
142,199,57;55,180,70;0,170,239;40,56,146;147,37,139]./255;
% CM=slanCM(184,10);
% 绘制圆圈
hold on
T=0;R=1;
t=linspace(0,2*pi,100);
x=cos(t).*.7;
y=sin(t).*.7;
for i=1:4:length(Pi)
X=R.*cos(T);Y=R.*sin(T);
tNum=Pi(i:i+3);
numNum=find([diff(sort(tNum)),1]);
numNum=[numNum(1),diff(numNum)];
cumNum=cumsum(numNum);
uniNum=unique(tNum);
for j=length(cumNum):-1:1
fill(x./4.*cumNum(j)+X,y./4.*cumNum(j)+Y,CM(uniNum(j)+1,:),'EdgeColor','none')
end
T=T+1./R.*1.4;
R=a+b*T;
end
text(14,16.5,{'The ratio of four numbers from \pi';'—— 1200 digits'},...
'Color',[1,1,1],'FontName','Cambria',...
'HorizontalAlignment','right','FontSize',23,'FontAngle','italic')
% 图窗和坐标区域修饰
set(gcf,'Position',[200,100,820,820]);
ax=gca;
ax.XLim=[-15,15.5];
ax.YLim=[-15,19];
ax.XTick=[];
ax.YTick=[];
ax.Color=[0,0,0];
ax.DataAspectRatio=[1,1,1];
15 graph
% 构建连接矩阵
corrMat=zeros(10,10);
Pi=getPi(401);
for i=1:400
corrMat(Pi(i)+1,Pi(i+1)+1)=corrMat(Pi(i)+1,Pi(i+1)+1)+1;
end
% 配色列表
colorList=[0.3725 0.2745 0.5647
0.1137 0.4118 0.5882
0.2196 0.6510 0.6471
0.0588 0.5216 0.3294
0.4510 0.6863 0.2824
0.9294 0.6784 0.0314
0.8824 0.4863 0.0196
0.8000 0.3137 0.2431
0.5804 0.2039 0.4314
0.4353 0.2510 0.4392];
t=linspace(0,2*pi,11);t=t(1:10)';
posXY=[cos(t),sin(t)];
maxWidth=max(corrMat(corrMat>0));
minWidth=min(corrMat(corrMat>0));
ttList=linspace(0,1,3)';
% 循环绘图
hold on
for i=1:size(corrMat,1)
for j=i+1:size(corrMat,2)
if corrMat(i,j)>0
tW=(corrMat(i,j)-minWidth)./(maxWidth-minWidth);
colorData=(1-ttList).*colorList(i,:)+ttList.*colorList(j,:);
CData(:,:,1)=colorData(:,1);
CData(:,:,2)=colorData(:,2);
CData(:,:,3)=colorData(:,3);
% 绘制连线
fill(linspace(posXY(i,1),posXY(j,1),3),...
linspace(posXY(i,2),posXY(j,2),3),[0,0,0],'LineWidth',tW.*12+1,...
'CData',CData,'EdgeColor','interp','EdgeAlpha',.7,'FaceAlpha',.7)
end
end
% 绘制圆点
scatter(posXY(i,1),posXY(i,2),200,'filled','LineWidth',1.2,...
'MarkerFaceColor',colorList(i,:),'MarkerEdgeColor',[.7,.7,.7]);
text(posXY(i,1).*1.13,posXY(i,2).*1.13,num2str(i-1),'Color',[1,1,1].*.7,...
'FontSize',30,'FontWeight','bold','FontName','Cambria','HorizontalAlignment','center')
end
text(0,1.3,'Numerical adjacency of \pi — 400 digits','Color',[1,1,1],'FontName','Cambria',...
'HorizontalAlignment','center','FontSize',25,'FontAngle','italic')
% 图窗和坐标区域修饰
set(gcf,'Position',[200,100,820,820]);
ax=gca;
ax.XLim=[-1.2,1.2];
ax.YLim=[-1.21,1.5];
ax.XTick=[];
ax.YTick=[];
ax.Color=[0,0,0];
ax.DataAspectRatio=[1,1,1];
16 circos chart
Need to use this tool:
Class=getPi(1001)+1;
Data=diag(ones(1,1000),-1);
className={'0','1','2','3','4','5','6','7','8','9'};
colorOrder=[239,65,75;230,115,48;229,158,57;232,136,85;239,199,97;
144,180,116;78,166,136;81,140,136;90,118,142;43,121,159]./255;
CC=circosChart(Data,Class,'ClassName',className,'ColorOrder',colorOrder);
CC=CC.draw();
ax=gca;
ax.Color=[0,0,0];
CC.setClassLabel('Color',[1,1,1],'FontSize',25,'FontName','Cambria')
CC.setLine('LineWidth',.7)
YOU CAN GET ALL CODE HERE:
Can you solve it?
Chord diagrams are very common in Python and R, but there are no related functions in MATLAB before. It is not easy to draw chord diagrams of the same quality as R language, But I created a MATLAB tool that could almost do it.
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↑ ↑ ↑ ↑ ↑ ↑ ↑ ↑ ↑ ↑
Here is the help document:
1 Data Format
The data requirement is a numerical matrix with all values greater than or equal to 0, or a table array, or a numerical matrix and cell array for names. First, give an example of a numerical matrix:
1.1 Numerical Matrix
dataMat=randi([0,5],[5,4]);
% 绘图(draw)
CC=chordChart(dataMat);
CC=CC.draw();
Since each object is not named, it will be automatically named Rn and Cn
1.2 Numerical Matrix and Cell Array for Names
dataMat=[2 0 1 2 5 1 2;
3 5 1 4 2 0 1;
4 0 5 5 2 4 3];
colName={'G1','G2','G3','G4','G5','G6','G7'};
rowName={'S1','S2','S3'};
CC=chordChart(dataMat,'rowName',rowName,'colName',colName);
CC=CC.draw();
RowName should be the same size as the rows of the matrix
ColName should be the same size as the columns of the matrix
For this example, if the value in the second row and third column is 1, it indicates that there is an energy flow from S2 to G3, and a chord with a width of 1 is needed between these two.
1.3 Table Array
A table array in the following format is required:
2 Decorate Chord
2.1 Batch modification of chords
Batch modification of chords can be done using the setChordProp function, and all properties of the Patch object can be modified. For example, modifying the color of the string, edge color, edge line sstyle, etc.:
CC.setChordProp('EdgeColor',[.3,.3,.3],'LineStyle','--',...
'LineWidth',.1,'FaceColor',[.3,.3,.3])
2.2 Individual Modification of Chord
The individual modification of chord can be done using the setChordMN function, where the values of m and n correspond exactly to the rows and columns of the original numerical matrix. For example, changing the color of the strings flowing from S2 to G4 to red:
CC.setChordMN(2,4,'FaceColor',[1,0,0])
2.3 Color Mapping of Chords
Just use function colormap to do so:
% version 1.7.0更新
% 可使用colormap函数直接修改颜色
% Colors can be adjusted directly using the function colormap(demo4)
colormap(flipud(pink))
3 Arc Shaped Block Decoration
3.1 Batch Decoration of Arc-Shaped Blocks
use:
- setSquareT_Prop
- setSquareF_Prop
to modify the upper and lower blocks separately, and all attributes of the Patch object can be modified. For example, batch modify the upper blocks (change to black):
CC.setSquareT_Prop('FaceColor',[0,0,0])
3.2 Arc-Shaped Blocks Individually Decoration
use:
- setSquareT_N
- setSquareF_N
to modify the upper and lower blocks separately. For example, modify the second block above separately (changed to red):
CC.setSquareT_N(2,'FaceColor',[.8,0,0])
4 Font Adjustment
Use the setFont function to adjust the font, and all properties of the text object can be modified. For example, changing the font size, font, and color of the text:
CC.setFont('FontSize',25,'FontName','Cambria','Color',[0,0,.8])
5 Show and Hide Ticks
Usage:
CC.tickState('on')
% CC.tickState('off')
6 Attribute 'Sep' with Adjustable Square Spacing
If the matrix size is large, the drawing will be out of scale:
dataMat=randi([0,1],[20,10]);
CC=chordChart(dataMat);
CC=CC.draw();
% CC.tickState('on')
We can modify its Sep attribute:
dataMat=randi([0,1],[20,10]);
% use Sep to decrease space (separation)
% 使用 sep 减小空隙
CC=chordChart(dataMat,'Sep',1/120);
CC=CC.draw();
7 Modify Text Direction
dataMat=randi([0,1],[20,10]);
% use Sep to decrease space (separation)
% 使用 sep 减小空隙
CC=chordChart(dataMat,'Sep',1/120);
CC=CC.draw();
CC.tickState('on')
% version 1.7.0更新
% 函数labelRatato用来旋转标签
% The function labelRatato is used to rotate the label
CC.labelRotate('on')
8 Add Tick Labels
dataMat=[2 0 1 2 5 1 2;
3 5 1 4 2 0 1;
4 0 5 5 2 4 3];
colName={'G1','G2','G3','G4','G5','G6','G7'};
rowName={'S1','S2','S3'};
CC=chordChart(dataMat,'rowName',rowName,'colName',colName);
CC=CC.draw();
CC.setFont('FontSize',17,'FontName','Cambria')
% 显示刻度和数值
% Displays scales and numeric values
CC.tickState('on')
CC.tickLabelState('on')
% 调节标签半径
% Adjustable Label radius
CC.setLabelRadius(1.3);
% figure()
% dataMat=[2 0 1 2 5 1 2;
% 3 5 1 4 2 0 1;
% 4 0 5 5 2 4 3];
% dataMat=dataMat+rand(3,7);
% dataMat(dataMat<1)=0;
%
% CC=chordChart(dataMat,'rowName',rowName,'colName',colName);
% CC=CC.draw();
% CC.setFont('FontSize',17,'FontName','Cambria')
%
% % 显示刻度和数值
% % Displays scales and numeric values
% CC.tickState('on')
% CC.tickLabelState('on')
%
% % 调节标签半径
% % Adjustable Label radius
% CC.setLabelRadius(1.4);
9 Custom Tick Label Format
A function handle is required to input numeric output strings. The format can be set through the setTickLabelFormat function, such as Scientific notation:
dataMat=[2 0 1 2 5 1 2;
3 5 1 4 2 0 1;
4 0 5 5 2 4 3];
dataMat=dataMat+rand(3,7);
dataMat(dataMat<1)=0;
dataMat=dataMat.*1000;
CC=chordChart(dataMat);
CC=CC.draw();
CC.setFont('FontSize',17,'FontName','Cambria')
% 显示刻度和数值
% Displays scales and numeric values
CC.tickState('on')
CC.tickLabelState('on')
% 调节标签半径
% Adjustable Label radius
CC.setLabelRadius(1.4);
% 调整数值字符串格式
% Adjust numeric string format
CC.setTickLabelFormat(@(x)sprintf('%0.1e',x))
10 A Demo
rng(2)
dataMat=randi([1,7],[11,5]);
colName={'Fly','Beetle','Leaf','Soil','Waxberry'};
rowName={'Bartomella','Bradyrhizobium','Dysgomonas','Enterococcus',...
'Lactococcus','norank','others','Pseudomonas','uncultured',...
'Vibrionimonas','Wolbachia'};
CC=chordChart(dataMat,'rowName',rowName,'colName',colName,'Sep',1/80);
CC=CC.draw();
% 修改上方方块颜色(Modify the color of the blocks above)
CListT=[0.7765 0.8118 0.5216;0.4431 0.4706 0.3843;0.5804 0.2275 0.4549;
0.4471 0.4039 0.6745;0.0157 0 0 ];
for i=1:5
CC.setSquareT_N(i,'FaceColor',CListT(i,:))
end
% 修改下方方块颜色(Modify the color of the blocks below)
CListF=[0.5843 0.6863 0.7843;0.1098 0.1647 0.3255;0.0902 0.1608 0.5373;
0.6314 0.7961 0.2118;0.0392 0.2078 0.1059;0.0157 0 0 ;
0.8549 0.9294 0.8745;0.3882 0.3255 0.4078;0.5020 0.7216 0.3843;
0.0902 0.1843 0.1804;0.8196 0.2314 0.0706];
for i=1:11
CC.setSquareF_N(i,'FaceColor',CListF(i,:))
end
% 修改弦颜色(Modify chord color)
for i=1:5
for j=1:11
CC.setChordMN(j,i,'FaceColor',CListT(i,:),'FaceAlpha',.5)
end
end
CC.tickState('on')
CC.labelRotate('on')
CC.setFont('FontSize',17,'FontName','Cambria')
Hope to have your Reviews and Stars!!!
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