Never mind. After trying at least a dozen suggestions over days, one of them plus the manual got me to the answer. The salient portion of my solution looks like this:
tiledlayout(2,1);
ax1 = nexttile;
ax2 = nexttile;
for ifile=1:1000
hold(ax1,'on');
plot(ax1, DataIn(:,1),DataIn(:,2));
hold(ax1,'off');
hold(ax2,'on');
plot(ax2, DataIn(:,1),DataIn(:,3));
hold(ax2,'off');
end
I decided I like the tiled output look for these plots. If I can do it for two, I can do it for six! I hope this helps anyone else faced with a similar problem.