Extracting network from a 3D geometry

I have a 3D volume like the above and I would like to extarct network/ skeletonize from this.

I would like to ask for suggestions on how this can be done.

[darova]

• binarize image
• use bwmorph to skeletonize

Answer 1

[Mahesh Taparia]

Hi

You can do this by using thresholding as suggested. For example, consider the line of code:

a=imread('image.png');
gray=rgb2gray(a);
b=imbinarize(gray);
imshow(b)