How to write code to implement, UPGMA, WPGMA, and neighbor joining algorithms
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How to implement, UPGMA, WPGMA, and neighbor joining algorithms?? I have this seq data:
data = {'A' 'ACTGGGCT'
'B' 'CGTGAGCT'
'C' 'ACTGTGCT'
'D' 'ACTGTGAT'}
and this the distance matrix of pairwise alignment of these seqs:
>> distances=[0 17.6 22.7 15.9; 17.6 0 18 13.8; 22.7 18 0 21.4; 15.9 13.8 21.4 0]
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