How do not open the "open reading frames" window with che command seqshoworfs?

1 回表示 (過去 30 日間)
Alessandro Dulja
Alessandro Dulja 2016 年 10 月 3 日
コメント済み: chaim giladi 2021 年 5 月 31 日
Hi, I need to iterate through 80K sequences and find the possible ORFs in each sequence. I have been struggling with this since the command seqshoworfs automatically opens one window for each sequence analyzed and since I have so many sequences it gets stuck ("busy") and won't work anymore. Is there a way I can avoid displaying this window? Thank you all very much

採用された回答

Joe Yeh
Joe Yeh 2016 年 10 月 3 日
It's not clear from the documentation, but if you do
edit seqshoworfs.m
You'll see that it can take 'nodisplay' argument (line 165). To suppress display, you simply have to issue command like this:
result = seqshoworfs(seq, 'nodisplay', 'true');
  2 件のコメント
Alessandro Dulja
Alessandro Dulja 2016 年 10 月 4 日
Thank you very much for your help, it now works correctly.
chaim giladi
chaim giladi 2021 年 5 月 31 日
thanks from me too.
glad to have found this, though I have only 3523 sequences to run :)

サインインしてコメントする。

その他の回答 (0 件)

カテゴリ

Help Center および File ExchangeMigrate GUIDE Apps についてさらに検索

タグ

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!

Translated by