Curvature measure and visualization

バージョン 1.0.6.0 (535 KB) 作成者: Preetham Manjunatha
Measures the shape properties of the object boundaries and displays the curvature.
0.0
(0)
ダウンロード: 381
更新 2023/3/31
GitHub でライセンスを表示

Introduction

View Measure curvature and visualize on File Exchange Open in MATLAB Online

Measures the shape properties of the object boundaries and displays the curvature.

Original author: Dr. Meghan Driscoll
Modified and compacted/concised a complicated codebase by: Preetham Manjunatha

Thanks to Dr. Meghan Driscoll who kindly shared her code for academic purpose. If you use this code for visualization and other academic/research/any purposes.

Please cite:

Reference: Driscoll MK, McCann C, Kopace R, Homan T, Fourkas JT, Parent C, et al. (2012) Cell Shape Dynamics: From Waves to Migration. PLoS Comput Biol 8(3): e1002392. https://doi.org/10.1371/journal.pcbi.1002392

Important note: This code uses parfor to speed up the things. If you do not have the Matlab parallel computing toolbox. Please make 'parfor' as 'for' in this function.

%%%%%%%% This code is way too slow! (curvature should not be in a for loop) %%%%%%%%% If I have time I will try to improve this. If anyone improves it, please share the modified version code with me.

Quick Pipeline Visualization

Example: Curvature visualization

Blob
blobviz
T-section
Tsectionviz 3

Requirements

MATLAB
MATLAB - Parallel Computing Toolbox

Feedback

Please rate and provide feedback for the further improvements.

引用

Preetham Manjunatha (2024). Curvature measure and visualization (https://github.com/preethamam/CurvatureVisualize/releases/tag/1.0.6), GitHub. 取得済み .

MATLAB リリースの互換性
作成: R2021a
すべてのリリースと互換性あり
プラットフォームの互換性
Windows macOS Linux

Community Treasure Hunt

Find the treasures in MATLAB Central and discover how the community can help you!

Start Hunting!

バージョン 公開済み リリース ノート
1.0.6.0

See release notes for this release on GitHub: https://github.com/preethamam/CurvatureVisualize/releases/tag/1.0.6
1.0.5

See release notes for this release on GitHub: https://github.com/preethamam/CurvatureVisualize/releases/tag/1.0.5
この GitHub アドオンでの問題を表示または報告するには、GitHub リポジトリにアクセスしてください。
この GitHub アドオンでの問題を表示または報告するには、GitHub リポジトリにアクセスしてください。